Our new software is out!
"Here, we present a new software package (CAGEE) for inferring patterns of increases and decreases in gene expression across a phylogenetic tree, as well as the rate at which these changes occur. In contrast to previous methods that treat each gene independently, CAGEE can calculate genome-wide rates of gene expression, along with ancestral states for each gene."
#phylogenetics #software #OpenSource
#introduction Hi! I am a research software engineer at Indiana University. I develop the CAFE application, an analyzer of gene family #evolution and support the software on IU's #HPC clusters. I like #bikes #cities and #opensource software.